Build reaction¶
- buildReaction(state, rateList, metList, numTerm, prodNum, reactionName, promiscuousRxnI)¶
Builds rate reaction file.
Based on https://doi.org/10.1186/1471-2105-10-238
USAGE:
buildReaction(state, rateList, metList, numTerm, prodNum, reactionName, promiscuousRxnI)
- INPUT:
state (char cell): output from reactionPatterm rateList (char cell): list with all the rate constants in the system metList (char cell): list with all mets concentrations showing up in thepseudo-first-order rate constants numTerm (char cell): numerator terms prodNum (int vector): products terms reactionName (char): reaction name promiscuousRxnI (int): index of promiscuous reaction
- OUTPUT:
written .m file with the reaction mechanism